Publications

Articles

CRISPR/Cas-mediated plant genome editing: outstanding challenges a decade after implementation

Cardi T., Murovec J., Bakhsh A., Boniecka J., Bruegmann T., Bull S. E., et al.

Trends in Plant Science, vol.28, no.10, pp.1144-1165, 2023 (SCI-Expanded, Scopus)

In-depth comparative transcriptome analysis of <i>Purpureocillium</i> sp. CB1 under cadmium stress

Kurt-Kızıldoğan A., Otur Ç., Yıldırım K., Kavas M., Abanoz-Seçgin B.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, vol.107, no.17, pp.5453-5467, 2023 (SCI-Expanded, Scopus) Sustainable Development

Development of Highly Efficient Resistance to Beet Curly Top Iran Virus (Becurtovirus) in Sugar Beet (B. vulgaris) via CRISPR/Cas9 System

Yildirim K., Kavas M., Sevgen Küçük I., Secgin Z., Saraç Ç.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, vol.24, no.7, 2023 (SCI-Expanded, Scopus)

Role of Exogenous Nitric Oxide in Protecting Plants against Abiotic Stresses

Pandey A., Khan M. K., HAMURCU M., Athar T., YERLİKAYA B. A., Yerlikaya S., et al.

AGRONOMY-BASEL, vol.13, no.5, 2023 (SCI-Expanded, Scopus) Sustainable Development

Genome editing for healthy crops: traits, tools and impacts

Yıldırım K., Miladinović D., Sweet J., Akin M., Galović V., Kavas M., et al.

FRONTIERS IN PLANT SCIENCE, vol.14, 2023 (SCI-Expanded, Scopus)

Genome-wide analysis of DUF221 domain-containing gene family in common bean and identification of its role on abiotic and phytohormone stress response

Kavas M., Mostafa K., Secgin Z., Yerlikaya B. A., Yıldırım K., Gokdemir G.

GENETIC RESOURCES AND CROP EVOLUTION, vol.70, no.1, pp.169-188, 2023 (SCI-Expanded, Scopus) Sustainable Development

General guidelines for CRISPR/Cas-based genome editing in plants

AKSOY E., YILDIRIM K., Kavas M., Kayihan C., YERLİKAYA B. A., Calik I., et al.

MOLECULAR BIOLOGY REPORTS, vol.49, no.12, pp.12151-12164, 2022 (SCI-Expanded, Scopus) Sustainable Development

Investigation and Expression Analysis of R2R3-MYBs and Anthocyanin Biosynthesis-Related Genes during Seed Color Development of Common Bean (Phaseolus vulgaris)

Kavas M., Abdulla M. F., Mostafa K., Secgin Z., Yerlikaya B. A., Otur Ç., et al.

PLANTS-BASEL, vol.11, no.23, 2022 (SCI-Expanded, Scopus)

Genome-Wide Identification of the Aconitase Gene Family in Tomato (Solanum lycopersicum) and CRISPR-Based Functional Characterization of SlACO2 on Male-Sterility

Secgin Z., ULUIŞIK S., YILDIRIM K., Abdulla M. F., Mostafa K., Kavas M.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, vol.23, no.22, 2022 (SCI-Expanded, Scopus)

CRISPR/Cas9 knock-out of SlPHD_MS1 (Solyc04g008420) gene results in complete male sterility in tomato

Gokdemir G., Secgin Z., ULUIŞIK S., Kavas M.

PLANT GROWTH REGULATION, vol.98, no.2, pp.329-341, 2022 (SCI-Expanded, Scopus)

Genome-based identification of beet curly top Iran virus infecting sugar beet in Turkey and investigation of its pathogenicity by agroinfection

YILDIRIM K., Kavas M., Kaya R., Secgin Z., Can C., Sevgen Küçük İ., et al.

JOURNAL OF VIROLOGICAL METHODS, vol.300, 2022 (SCI-Expanded, Scopus)

Genome-wide identification of the BURP domain-containing genes in Phaseolus vulgaris

Kavas M., YILDIRIM K., Secgin Z., Abdulla M. F., Gokdemir G.

PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS, vol.27, no.9, pp.1885-1902, 2021 (SCI-Expanded, Scopus)

Optimization of Agrobacterium-mediated transformation and regeneration for CRISPR/Cas9 genome editing of commercial tomato cultivars

Secgin Z., Kavas M., YILDIRIM K.

TURKISH JOURNAL OF AGRICULTURE AND FORESTRY, vol.45, no.6, pp.704-716, 2021 (SCI-Expanded, Scopus, TRDizin)

Ectopic expression of common bean ERF transcription factorPvERF35promotes salt stress tolerance in tobacco

Kavas M., Gokdemir G., Secgin Z., Bakhsh A.

PLANT BIOLOGY, vol.22, no.6, pp.1102-1112, 2020 (SCI-Expanded, Scopus)

Discovery of simple sequence repeat (SSR) markers in hazelnut (Corylus avellanaL.) by transcriptome sequencing and SSR-based characterization of hazelnut cultivars

Kavas M., Yıldırım K., Secgin Z., Gokdemir G.

SCANDINAVIAN JOURNAL OF FOREST RESEARCH, vol.35, no.5-6, pp.227-237, 2020 (SCI-Expanded, Scopus)

Development of new total RNA isolation method for tissues with rich phenolic compounds

Secgin Z., Gokdemir G., Atabay E. S., Kurt Kızıldoğan A., Kavas M.

TURKISH JOURNAL OF BIOCHEMISTRY-TURK BIYOKIMYA DERGISI, vol.45, no.4, pp.343-350, 2020 (SCI-Expanded, Scopus, TRDizin)

Overexpression of Ks-type dehydrins gene OeSRC1 from Olea europaea increases salt and drought tolerance in tobacco plants

Poku S. A., Secgin Z., Kavas M.

MOLECULAR BIOLOGY REPORTS, vol.46, no.6, pp.5745-5757, 2019 (SCI-Expanded, Scopus)

Gene expression analysis of bud burst process in European hazelnut (Corylus avellana L.) using RNA-Seq

Kavas M., Kurt Kızıldoğan A., Balik H. I.

PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS, vol.25, no.1, pp.13-29, 2019 (SCI-Expanded, Scopus)

Comparative genome-wide phylogenetic and expression analysis of SBP genes from potato (Solanum tuberosum)

Kavas M., Kizildogan A., Abanoz B.

COMPUTATIONAL BIOLOGY AND CHEMISTRY, vol.67, pp.131-140, 2017 (SCI-Expanded, Scopus)

Enhanced salt tolerance of transgenic tobacco expressing a wheat salt tolerance gene

Kavas M., BALOĞLU M. C., YÜCEL A. M., ÖKTEM H. A.

TURKISH JOURNAL OF BIOLOGY, vol.40, no.4, pp.727-735, 2016 (SCI-Expanded, Scopus, TRDizin)

GENOME-WIDE INVESTIGATION AND EXPRESSION ANALYSIS OF AP2-ERF GENE FAMILY IN SALT TOLERANT COMMON BEAN

Kavas M., Kurt Kızıldoğan A., Gokdemir G., BALOĞLU M. C.

EXCLI JOURNAL, vol.14, pp.1187-1206, 2015 (SCI-Expanded, Scopus)

ANTIOXIDANT RESPONSES OF PEANUT (ARACHIS HYPOGAEA L.) SEEDLINGS TO PROLONGED SALT-INDUCED STRESS

Kavas M., AKÇA O., Akcay U. C., Peksel B., EROĞLU S., ÖKTEM H. A., et al.

ARCHIVES OF BIOLOGICAL SCIENCES, vol.67, no.4, pp.1303-1312, 2015 (SCI-Expanded, Scopus)

Diverse expression pattern of wheat transcription factors against abiotic stresses in wheat species

BALOĞLU M. C., Inal B., Kavas M., ÜNVER T.

GENE, vol.550, no.1, pp.117-122, 2014 (SCI-Expanded, Scopus)

VECTOR CONSTRUCTION STRATEGIES FOR TRANSFORMATION OF WHEAT PLANT

Baloglu M. C., Battal A., Aydin G., Eroglu A., Oz M. T., Kavas M., et al.

JOURNAL OF ANIMAL AND PLANT SCIENCES, vol.23, no.3, pp.906-912, 2013 (SCI-Expanded, Scopus)

Antioxidative and physiological responses of two sunflower (Helianthus annuus) cultivars under PEG-mediated drought stress

Baloǧlu M. C., Kavas M., Aydin G., ÖKTEM H. A., YÜCEL A. M.

Turkish Journal of Botany, vol.36, no.6, pp.707-714, 2012 (SCI-Expanded, Scopus, TRDizin)

Production of hyperthermostable GH10 xylanase Xyl10B from Thermotoga maritima in transplastomic plants enables complete hydrolysis of methylglucuronoxylan to fermentable sugars for biofuel production

Kim J. Y., Kavas M., Fouad W. M., Nong G., Preston J. F., Altpeter F.

Plant Molecular Biology, vol.76, no.3-5, pp.357-369, 2011 (SCI-Expanded, Scopus)

Drought-induced oxidative damage and antioxidant responses in peanut (Arachis hypogaea L.) seedlings

Akcay U. C., Ercan O., Kavas M., Yildiz L., YILMAZ C., ÖKTEM H. A., et al.

Plant Growth Regulation, vol.61, no.1, pp.21-28, 2010 (SCI-Expanded, Scopus)

Factors affecting plant regeneration from immature inflorescence of two winter wheat cultivars

Kavas M., ÖKTEM H. A., YÜCEL M.

Biologia Plantarum, vol.52, no.4, pp.621-626, 2008 (SCI-Expanded, Scopus)

Papers Published in Refereed Scientific Meetings

Application of multiplexed CRISPR-ACT3.0 gene activation system in tomato roots for enhancing resistance against plant-parasitic nematodes

Mostafa K., Abdulla M. F., Kavas M.

4th PlantEd Conference, Porto, Portugal, 18 - 21 September 2023, pp.52, (Summary Text)

RNA-SEQ ANALYSIS AND TRANSCRIPTOME ASSEMBLY FOR EUROPEAN HAZELNUT (CORYLUS AVELLANA L.) LEAF BUDS

KAVAS M., KURT KIZILDOĞAN A.

Costas2017, 9 - 11 November 2017, (Summary Text)

CRISPR/Cas9-mediated genome editing in petunia plants: enhanced plant architecture with compactness and flower abundance

Abdulla M. F., Mostafa K., Kavas M.

4th PlantEd Conference, Porto, Portugal, 18 - 21 September 2023, pp.76, (Summary Text)

Efficient Regeneration from Inflorescence and Agrobacterium Mediated Gene Transfer in Wheat

Demirbaş D., Öktem H. A., Kavas M., Yücel A. M.

14. Ulusal biyoteknoloji kongresi, Eskişehir, Turkey, 31 August - 02 September 2005, (Full Text)

Development of drought-resistant tomato plants by knocking out the AHP genes

AYDIN A., Yerlikaya S., YERLİKAYA B. A., YILMAZ N. N., KAVAS M.

4th PlantEd Congress, Porto, Portugal, 18 - 20 September 2023, (Summary Text)

Transcriptome-wide analysis of hazelnut MYB and bHLH transcription factor family members during leafdevelopment.

IMANZHANOV, M., SEÇGİN Z., KAVAS M.

International Green Biotechnology Congress, 11 - 13 September 2017, (Summary Text)

Conferring Multiple Resistance to DNA Viruses in Plants with the CRISPR/Cas9 Genome Editing Technology

YILDIRIM K., KAVAS M.

1st PlantEd Conference Plant Genome Editing - State of the Art, Novi-Sad, Serbia, 5 - 07 November 2019, (Summary Text)

CRISPR/Cas9 mediated resistance to Becurtovirus in sugar beet

YILDIRIM K., KAVAS M., SEVGEN KÜÇÜK İ., seçgin z., SARAÇ Ç.

4th PlantEd Congress: Genome editing in plants, Porto, Portugal, 18 September 2023, (Summary Text)

Cloning of Wheat NAC type Transcription Factors and Agrobacterium mediatted Transformation of wheat Mature and Immature Embryos

KAVAS M., YOON K. J., NONG G., FOUAD W., JAMES P., ALTPETER F.

Plant Transformation Technologies II, VİYENA, Austria, 19 - 22 February 2011

Publications

Articles

Papers Published in Refereed Scientific Meetings

Books & Book Chapters